Yeah, there were many several moments for me in III.
Michaelangelo in the village, rescuing Yoshi, April taken to the Shogun's palace, the first showdown with Walker. Well, they're not all great, but they're memorable.
SotO I only remember mostly the final scenes: Super Shredder, Tokka+Razhar, Vanilla Ice, balloney fight, and a computer room. Which, in my head, is how I summarize the movie. Oh, and Keno.
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