Yeah, I remember that, I think it's as people have pointed out, his first and foremost priority was to kill Splinter. At that time he was also trying to find Karai and also was asking the Kraang to mutate her back to human so I think he was holding on before he turned on them. Didn't he say something about dealing with them but not yet? I can't remember what but it was something like that.
I had the feeling he certainly wanted power, just not in the same way as 80s shredder?
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