Favorite Turtles In Time Level
 

I'd have to go with the Neon Night Riders level or Bury My Shell At Wounded Knee. Neon Night Riders is amazing in my opinion because of the background music and the level design is awesome.

Alleycat Blues. I know it's before the time travel, but I like the Metalhead appearance as the boss fight.

Totally agree with you on Neon Night Riders. Coolest level design and best music IMO. But on the other hand, you spend the entirety of the level on a hoverboard, moving automatically, with virtually zero stage interactivity, which basically makes it a sort of dull thing to go about doing if not for the bells & whistles. That being said, as far as sidescrolling stages are concerned, as much as I hate the mousers, I gotta go with the Technodrome. Rad music, the environment changes constantly and can be used to your advantage (or disadvantage!), and it even features an additional platform/boss. All around the best of them, I'd say.

I always liked the dinosaur level as a kid, plus Slash as the boss.

But really virtually all the levels in the game were almost equally awesome.

Count me in as someone else who's totally all for Neon Night Riders. :D

Also...

Bury My Shell at Wounded Knee was awesome. The dinosaur one was so damn hard! Slash was 10x more brutal than Shredder.

Bury My Shell at Wounded Knee was always my favorite whether it'd be the classic or the re-shelled version. It was such a fun stage to play and plus Leatherhead is probably my favorite boss of the game.

Boy this is a tough one...but I would have to go with:

Starbase...where no Turtle has gone before.

I love the music and the background layouts. The level is awesome.

Close to 2nd place...I would have to say: Skull & Crossbones. Good music

I'm the exact same. Though Starbase has my favorite turtles music ever. Its been my ringtone for years now.